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Pneumonia due to Streptococcus pneumoniae

DOID EFO MESH SNOMED PheWeb

J10_PNEUMOPNEUMO

streptococcal pneumonia: A febrile disease caused by streptococcus pneumoniae.

Endpoint definition

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FinnGen phenotype data

356077 individuals

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Apply sex-specific rule None

356077

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Check conditions None

356077

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Filter registries

Hospital Discharge: ICD-10 J13
Hospital discharge: ICD-9 481
Hospital discharge: ICD-8 48199
Cause of death: ICD-10 J13
Cause of death: ICD-9 481
Cause of death: ICD-8 48199

1169

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Check pre-conditions, main-only, mode, ICD version

Look only at ICD versions H.D: 10, 8, 9 ; C.O.D: 10, 8, 9

1160

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Check minimum number of events None

1160

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Include endpoints None

1160

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J10_PNEUMOPNEUMO

Extra metadata

Level in the ICD hierarchy 4
First used in FinnGen datafreeze DF2
Parent code in ICD-10 J09-J18
Name in latin Pneumonia a Streptococco pneumoniae

Summary Statistics

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Key figures

All Female Male
Number of individuals 1160 471 689
Unadjusted prevalence (%) 0.33 0.24 0.44
Mean age at first event (years) 49.83 47.22 51.62

Mortality

Follow-up Absolute risk HR [95% CI] p N
1998–2019 0.08 4.73 [2.16, 10.36] 1.1e-4 244
15 years 0.02 2.31 [1.33, 4.03] 3.0e-3 77
5 years 0.01 6.40 [4.50, 9.10] 4.6e-25 80
1 year - - - -

Age distribution of first events

Year distribution of first events

Cumulative Incidence

Correlations

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Index endpoint: J10_PNEUMOPNEUMO – Pneumonia due to Streptococcus pneumoniae
GWS hits:

Survival analyses between endpoints

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Plot

before Pneumonia due to Streptococcus pneumoniae
after Pneumonia due to Streptococcus pneumoniae

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Drugs most likely to be purchased after Pneumonia due to Streptococcus pneumoniae

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